Table 2 Taxonomic classification and mean reads for the 267 bacteria identified, overall and by age groups
Phyla | Class | Genus | Species | Â | Age Categories (years) | ||
|---|---|---|---|---|---|---|---|
Overall | 50–59 | 60–69 | ≥70 | ||||
p__Actinobacteria | c__Actinobacteria | g__Actinobaculum | s__sp._oral_taxon_183 | 89.8 | 95.0 | 88.9 | 88.0 |
p__Actinobacteria | c__Actinobacteria | g__Actinobaculum | s__sp._oral_taxon_848 | 48.2 | 37.3 | 52.9 | 48.2 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__gerencseriae | 68.6 | 60.5 | 66.7 | 75.6 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__israelii | 25.1 | 19.5 | 24.1 | 29.5 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__johnsonii | 106.0 | 104.9 | 105.2 | 107.6 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__massiliensis | 112.1 | 134.2 | 121.5 | 87.4 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__meyeri | 59.3 | 64.8 | 61.6 | 53.3 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__naeslundii | 453.1 | 482.6 | 447.6 | 443.6 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__oris | 225.7 | 236.6 | 218.8 | 228.5 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__sp._oral_taxon_169 | 195.8 | 251.2 | 183.7 | 180.4 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__sp._oral_taxon_170 | 60.4 | 44.8 | 59.8 | 70.0 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__sp._oral_taxon_171 | 88.2 | 86.5 | 89.2 | 87.9 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__sp._oral_taxon_178 | 27.0 | 23.9 | 26.8 | 29.0 |
p__Actinobacteria | c__Actinobacteria | g__Actinomyces | s__sp._oral_taxon_180 | 119.0 | 121.7 | 123.6 | 111.5 |
p__Actinobacteria | c__Actinobacteria | g__Bifidobacterium | s__dentium | 88.5 | 83.0 | 75.8 | 108.2 |
p__Actinobacteria | c__Actinobacteria | g__Corynebacterium | s__durum | 121.3 | 153.3 | 120.2 | 104.7 |
p__Actinobacteria | c__Actinobacteria | g__Corynebacterium | s__matruchotii | 1107 | 1095 | 1178 | 1020 |
p__Actinobacteria | c__Actinobacteria | g__Microbacterium | s__flavescens | 1.5 | 1.8 | 1.6 | 1.1 |
p__Actinobacteria | c__Actinobacteria | g__Rothia | s__aeria | 323.3 | 311.6 | 378.9 | 257.6 |
p__Actinobacteria | c__Actinobacteria | g__Rothia | s__dentocariosa | 975.6 | 915.0 | 1039 | 927.8 |
p__Actinobacteria | c__Actinobacteria | g__Rothia | s__mucilaginosa | 185.3 | 125.4 | 179.1 | 226.9 |
p__Actinobacteria | c__Actinobacteria | g__Scardovia | s__wiggsiae | 68.7 | 74.1 | 69.7 | 64.4 |
p__Actinobacteria | c__Coriobacteriia | g__Atopobium | s__parvulum | 77.9 | 57.2 | 78.3 | 88.8 |
p__Actinobacteria | c__Coriobacteriia | g__Atopobium | s__rimae | 200.0 | 107.8 | 200.0 | 251.7 |
p__Actinobacteria | c__Coriobacteriia | g__Atopobium | s__sp._oral_taxon_199 | 47.4 | 39.1 | 61.2 | 34.0 |
p__Actinobacteria | c__Coriobacteriia | g__Atopobium | s__sp._oral_taxon_416 | 25.4 | 1.1 | 14.6 | 53.1 |
p__Actinobacteria | c__Coriobacteriia | g__Olsenella | s__sp._oral_taxon_807 | 46.9 | 38.6 | 44.5 | 54.7 |
p__Bacteroidetes | c__Bacteroidetes_[C-1] | g__Bacteroidetes_[G-5] | s__sp._oral_taxon_511 | 137.4 | 87.8 | 155.7 | 141.4 |
p__Bacteroidetes | c__Bacteroidia | g__Alloprevotella | s__rava | 82.4 | 52.8 | 87.6 | 92.3 |
p__Bacteroidetes | c__Bacteroidia | g__Alloprevotella | s__sp._oral_taxon_308 | 28.6 | 21.3 | 24.9 | 37.4 |
p__Bacteroidetes | c__Bacteroidia | g__Alloprevotella | s__sp._oral_taxon_473 | 77.5 | 63.0 | 82.6 | 79.1 |
p__Bacteroidetes | c__Bacteroidia | g__Alloprevotella | s__tannerae | 1562 | 1427 | 1580 | 1615 |
p__Bacteroidetes | c__Bacteroidia | g__Bacteroidaceae_[G-1] | s__sp._oral_taxon_272 | 39.5 | 24.6 | 28.6 | 62.2 |
p__Bacteroidetes | c__Bacteroidia | g__Bacteroidales_[G-2] | s__sp._oral_taxon_274 | 885.8 | 548.7 | 935.5 | 1010 |
p__Bacteroidetes | c__Bacteroidia | g__Porphyromonas | s__catoniae | 104.1 | 111.4 | 115.8 | 84.7 |
p__Bacteroidetes | c__Bacteroidia | g__Porphyromonas | s__endodontalis | 602.5 | 560.5 | 657.1 | 555.0 |
p__Bacteroidetes | c__Bacteroidia | g__Porphyromonas | s__gingivalis | 1055 | 781.4 | 752.8 | 1603 |
p__Bacteroidetes | c__Bacteroidia | g__Porphyromonas | s__sp._oral_taxon_275 | 46.0 | 29.0 | 62.6 | 33.9 |
p__Bacteroidetes | c__Bacteroidia | g__Porphyromonas | s__sp._oral_taxon_278 | 39.2 | 22.1 | 43.1 | 43.6 |
p__Bacteroidetes | c__Bacteroidia | g__Porphyromonas | s__sp._oral_taxon_279 | 310.5 | 255.9 | 315.5 | 334.7 |
p__Bacteroidetes | c__Bacteroidia | g__Porphyromonas | s__sp._oral_taxon_284 | 183.2 | 187.5 | 187.8 | 174.9 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__baroniae | 50.3 | 29.2 | 60.5 | 48.8 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__buccae | 53.1 | 17.3 | 63.0 | 60.4 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__dentalis | 102.3 | 63.3 | 120.3 | 100.8 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__denticola | 773.5 | 501.4 | 724.4 | 989.9 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__histicola | 100.3 | 48.8 | 72.7 | 165.3 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__intermedia | 671.5 | 613.0 | 766.5 | 580.8 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__loescheii | 119.6 | 131.7 | 138.7 | 87.8 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__maculosa | 185.9 | 139.8 | 180.0 | 219.4 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__melaninogenica | 339.1 | 236.0 | 321.8 | 419.4 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__micans | 42.7 | 37.6 | 37.1 | 52.9 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__multiformis | 46.7 | 9.2 | 36.1 | 81.6 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__nigrescens | 1997 | 1719 | 1960 | 2200 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__oralis | 174.4 | 78.8 | 158.9 | 248.2 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__oris | 1968 | 1700 | 2093 | 1956 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__oulorum | 211.7 | 216.2 | 182.8 | 246.8 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__pallens | 94.4 | 91.5 | 71.4 | 125.9 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__pleuritidis | 579.6 | 478.7 | 606.4 | 601.4 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__saccharolytica | 73.7 | 52.8 | 80.9 | 76.1 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__salivae | 120.5 | 94.7 | 117.3 | 139.1 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__sp._oral_taxon_292 | 69.4 | 50.1 | 57.5 | 95.7 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__sp._oral_taxon_300 | 269.5 | 256.3 | 243.5 | 310.7 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__sp._oral_taxon_306 | 41.1 | 17.2 | 38.9 | 57.5 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__sp._oral_taxon_313 | 70.5 | 86.9 | 44.0 | 95.8 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__sp._oral_taxon_314 | 65.2 | 59.2 | 52.7 | 85.0 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__sp._oral_taxon_317 | 832.0 | 631.4 | 832.4 | 944.0 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__sp._oral_taxon_376 | 44.8 | 45.1 | 43.6 | 46.1 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__sp._oral_taxon_472 | 250.3 | 270.4 | 279.0 | 201.9 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__sp._oral_taxon_475 | 21.8 | 19.1 | 17.4 | 28.9 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__sp._oral_taxon_526 | 55.1 | 21.5 | 70.7 | 53.7 |
p__Bacteroidetes | c__Bacteroidia | g__Prevotella | s__veroralis | 113.8 | 84.1 | 160.3 | 70.0 |
p__Bacteroidetes | c__Bacteroidia | g__Tannerella | s__forsythia | 577.6 | 374.7 | 542.0 | 737.8 |
p__Bacteroidetes | c__Bacteroidia | g__Tannerella | s__sp._oral_taxon_286 | 93.0 | 68.6 | 100.9 | 96.6 |
p__Bacteroidetes | c__Bacteroidia | g__Tannerella | s__sp._oral_taxon_808 | 35.6 | 25.4 | 32.6 | 45.3 |
p__Bacteroidetes | c__Flavobacteriia | g__Bergeyella | s__sp._oral_taxon_322 | 164.1 | 194.8 | 173.9 | 134.1 |
p__Bacteroidetes | c__Flavobacteriia | g__Bergeyella | s__sp._oral_taxon_907 | 34.8 | 34.7 | 36.7 | 32.4 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__gingivalis | 502.9 | 619.2 | 471.7 | 478.3 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__granulosa | 597.4 | 513.3 | 629.6 | 602.6 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__leadbetteri | 614.5 | 534.6 | 619.4 | 653.0 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_323 | 37.7 | 26.7 | 40.2 | 40.5 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_324 | 33.8 | 19.5 | 32.3 | 43.8 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_326 | 258.0 | 222.7 | 281.8 | 246.9 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_332 | 64.5 | 104.3 | 60.6 | 47.3 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_336 | 159.5 | 127.8 | 157.8 | 179.6 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_338 | 62.3 | 62.5 | 56.7 | 69.5 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_380 | 29.6 | 23.3 | 40.3 | 19.1 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_412 | 43.7 | 42.0 | 46.4 | 41.2 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_864 | 76.3 | 76.5 | 80.4 | 70.9 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_902 | 45.4 | 51.0 | 43.5 | 44.7 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sp._oral_taxon_903 | 37.1 | 26.6 | 37.4 | 42.5 |
p__Bacteroidetes | c__Flavobacteriia | g__Capnocytophaga | s__sputigena | 416.4 | 448.8 | 405.0 | 413.0 |
p__Chloroflexi | c__Anaerolineae | g__Anaerolineae_[G-1] | s__sp._oral_taxon_439 | 59.1 | 30.1 | 54.2 | 81.8 |
p__Firmicutes | c__Bacilli | g__Abiotrophia | s__defectiva | 104.2 | 135.7 | 109.9 | 79.0 |
p__Firmicutes | c__Bacilli | g__Gemella | s__haemolysans | 338.8 | 412.1 | 338.9 | 297.4 |
p__Firmicutes | c__Bacilli | g__Gemella | s__morbillorum | 603.8 | 670.7 | 622.2 | 542.2 |
p__Firmicutes | c__Bacilli | g__Gemella | s__sanguinis | 44.3 | 33.8 | 36.2 | 60.7 |
p__Firmicutes | c__Bacilli | g__Granulicatella | s__adiacens | 532.6 | 564.2 | 523.2 | 527.1 |
p__Firmicutes | c__Bacilli | g__Granulicatella | s__elegans | 39.7 | 49.7 | 37.7 | 36.7 |
p__Firmicutes | c__Bacilli | g__Lactobacillus | s__gasseri | 31.4 | 9.3 | 37.7 | 35.5 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__anginosus | 479.8 | 409.3 | 468.1 | 534.6 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__australis | 28.9 | 21.0 | 24.1 | 39.5 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__constellatus | 283.7 | 208.0 | 279.1 | 332.2 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__cristatus | 516.2 | 457.7 | 546.4 | 509.7 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__gordonii | 998.1 | 853.8 | 991.3 | 1088 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__intermedius | 897.1 | 1038 | 949.4 | 749.9 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__lactarius | 56.8 | 97.9 | 40.2 | 55.3 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__mutans | 530.8 | 392.2 | 500.4 | 648.0 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__oralis | 6725 | 8031 | 6651 | 6089 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__parasanguinis_I | 59.7 | 48.6 | 51.2 | 77.0 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__parasanguinis_II | 141.3 | 124.2 | 126.4 | 170.2 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__salivarius | 460.0 | 399.7 | 455.1 | 500.2 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__sanguinis | 1128 | 1441 | 1133 | 945.5 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__sinensis | 29.3 | 32.1 | 14.3 | 47.4 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__sobrinus | 52.0 | 2.5 | 19.9 | 121.7 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__sp._oral_taxon_056 | 90.0 | 102.7 | 82.4 | 92.7 |
p__Firmicutes | c__Bacilli | g__Streptococcus | s__sp._oral_taxon_074 | 68.3 | 54.3 | 71.9 | 71.6 |
p__Firmicutes | c__Clostridia | g__Butyrivibrio | s__sp._oral_taxon_080 | 24.6 | 14.1 | 35.9 | 15.9 |
p__Firmicutes | c__Clostridia | g__Catonella | s__morbi | 230.1 | 228.9 | 222.5 | 240.8 |
p__Firmicutes | c__Clostridia | g__Filifactor | s__alocis | 368.2 | 274.3 | 418.9 | 355.0 |
p__Firmicutes | c__Clostridia | g__Johnsonella | s__ignava | 114.9 | 104.7 | 111.8 | 124.5 |
p__Firmicutes | c__Clostridia | g__Johnsonella | s__sp._oral_taxon_166 | 32.7 | 17.7 | 43.8 | 26.7 |
p__Firmicutes | c__Clostridia | g__Lachnoanaerobaculum | s__orale | 31.4 | 35.3 | 24.9 | 37.6 |
p__Firmicutes | c__Clostridia | g__Lachnoanaerobaculum | s__saburreum | 152.3 | 124.4 | 153.0 | 167.0 |
p__Firmicutes | c__Clostridia | g__Lachnoanaerobaculum | s__umeaense | 52.9 | 50.6 | 55.5 | 50.7 |
p__Firmicutes | c__Clostridia | g__Lachnospiraceae_[G-3] | s__sp._oral_taxon_100 | 132.2 | 118.4 | 143.0 | 125.9 |
p__Firmicutes | c__Clostridia | g__Lachnospiraceae_[G-8] | s__sp._oral_taxon_500 | 45.1 | 40.6 | 48.1 | 43.7 |
p__Firmicutes | c__Clostridia | g__Oribacterium | s__sp._oral_taxon_078 | 112.2 | 68.2 | 102.9 | 149.0 |
p__Firmicutes | c__Clostridia | g__Parvimonas | s__micra | 848.4 | 791.4 | 915.0 | 793.8 |
p__Firmicutes | c__Clostridia | g__Parvimonas | s__sp._oral_taxon_393 | 265.1 | 361.3 | 250.6 | 230.0 |
p__Firmicutes | c__Clostridia | g__Peptostreptococcaceae_[XI][G-1] | s__[Eubacterium]_infirmum | 38.9 | 32.2 | 32.2 | 51.2 |
p__Firmicutes | c__Clostridia | g__Peptostreptococcaceae_[XI][G-5] | s__[Eubacterium]_saphenum | 87.3 | 55.6 | 107.1 | 79.2 |
p__Firmicutes | c__Clostridia | g__Peptostreptococcaceae_[XI][G-6] | s__[Eubacterium]_nodatum | 64.3 | 60.2 | 55.8 | 77.7 |
p__Firmicutes | c__Clostridia | g__Peptostreptococcaceae_[XI][G-7] | s__[Eubacterium]_yurii_subsps._yur | 146.2 | 167.1 | 151.3 | 127.9 |
p__Firmicutes | c__Clostridia | g__Peptostreptococcaceae_[XI][G-9] | s__[Eubacterium]_brachy | 200.8 | 208.5 | 203.6 | 192.7 |
p__Firmicutes | c__Clostridia | g__Peptostreptococcus | s__stomatis | 107.9 | 130.7 | 103.5 | 100.7 |
p__Firmicutes | c__Clostridia | g__Pseudoramibacter | s__alactolyticus | 70.8 | 73.3 | 52.7 | 93.0 |
p__Firmicutes | c__Clostridia | g__Ruminococcaceae_[G-1] | s__sp._oral_taxon_075 | 83.8 | 109.4 | 79.6 | 74.9 |
p__Firmicutes | c__Clostridia | g__Shuttleworthia | s__satelles | 35.3 | 21.3 | 40.5 | 36.3 |
p__Firmicutes | c__Clostridia | g__Stomatobaculum | s__longum | 55.2 | 47.4 | 52.5 | 63.0 |
p__Firmicutes | c__Erysipelotrichia | g__Solobacterium | s__moorei | 42.1 | 40.4 | 41.0 | 44.6 |
p__Firmicutes | c__Mollicutes | g__Mycoplasma | s__salivarium | 33.0 | 24.9 | 30.9 | 40.4 |
p__Firmicutes | c__Negativicutes | g__Anaeroglobus | s__geminatus | 767.6 | 402.1 | 582.4 | 1214 |
p__Firmicutes | c__Negativicutes | g__Centipeda | s__periodontii | 93.0 | 45.3 | 106.0 | 102.9 |
p__Firmicutes | c__Negativicutes | g__Dialister | s__invisus | 612.2 | 466.3 | 625.5 | 676.8 |
p__Firmicutes | c__Negativicutes | g__Dialister | s__pneumosintes | 225.5 | 179.8 | 224.8 | 252.1 |
p__Firmicutes | c__Negativicutes | g__Megasphaera | s__micronuciformis | 208.0 | 136.7 | 212.5 | 242.2 |
p__Firmicutes | c__Negativicutes | g__Megasphaera | s__sp._oral_taxon_123 | 158.7 | 166.4 | 138.4 | 180.8 |
p__Firmicutes | c__Negativicutes | g__Mitsuokella | s__sp._oral_taxon_131 | 117.5 | 40.4 | 143.3 | 127.2 |
p__Firmicutes | c__Negativicutes | g__Mitsuokella | s__sp._oral_taxon_521 | 31.2 | 11.1 | 13.3 | 65.7 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__artemidis | 738.5 | 720.4 | 712.4 | 782.7 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__dianae | 47.4 | 36.6 | 36.3 | 67.9 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__flueggei | 166.3 | 137.2 | 160.7 | 190.0 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__infelix | 272.6 | 194.0 | 268.0 | 322.7 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__noxia | 1502 | 1474 | 1514 | 1500 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_126 | 102.4 | 92.1 | 105.4 | 104.2 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_133 | 44.7 | 44.7 | 43.4 | 46.3 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_134 | 357.6 | 200.4 | 361.3 | 440.9 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_136 | 318.2 | 182.9 | 317.6 | 394.8 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_137 | 494.2 | 423.6 | 520.8 | 499.2 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_146 | 119.4 | 98.3 | 117.8 | 133.2 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_149 | 19.7 | 9.7 | 25.0 | 18.4 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_442 | 27.3 | 14.0 | 37.6 | 21.3 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_478 | 15.5 | 12.0 | 12.6 | 21.2 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_892 | 223.3 | 222.2 | 211.7 | 239.0 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_919 | 187.4 | 170.1 | 178.5 | 208.7 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_936 | 83.7 | 62.0 | 73.5 | 109.1 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sp._oral_taxon_937 | 22.1 | 14.6 | 22.5 | 25.7 |
p__Firmicutes | c__Negativicutes | g__Selenomonas | s__sputigena | 3283 | 2195 | 2957 | 4319 |
p__Firmicutes | c__Negativicutes | g__Veillonella | s__atypica | 586.0 | 380.8 | 569.5 | 722.5 |
p__Firmicutes | c__Negativicutes | g__Veillonella | s__denticariosi | 201.2 | 265.6 | 159.9 | 218.6 |
p__Firmicutes | c__Negativicutes | g__Veillonella | s__dispar | 8720 | 7556 | 8534 | 9615 |
p__Firmicutes | c__Negativicutes | g__Veillonella | s__parvula | 6529 | 5964 | 6121 | 7376 |
p__Firmicutes | c__Negativicutes | g__Veillonella | s__rogosae | 202.3 | 138.4 | 208.0 | 230.9 |
p__Firmicutes | c__Negativicutes | g__Veillonella | s__sp._oral_taxon_780 | 109.3 | 147.1 | 100.8 | 99.2 |
p__Firmicutes | c__Negativicutes | g__Veillonellaceae_[G-1] | s__sp._oral_taxon_129 | 54.4 | 27.0 | 45.9 | 81.0 |
p__Firmicutes | c__Negativicutes | g__Veillonellaceae_[G-1] | s__sp._oral_taxon_145 | 59.1 | 39.5 | 58.4 | 70.9 |
p__Firmicutes | c__Negativicutes | g__Veillonellaceae_[G-1] | s__sp._oral_taxon_150 | 295.0 | 204.8 | 251.6 | 402.1 |
p__Firmicutes | c__Negativicutes | g__Veillonellaceae_[G-1] | s__sp._oral_taxon_155 | 265.6 | 194.6 | 212.4 | 374.6 |
p__Fusobacteria | c__Fusobacteriia | g__Fusobacterium | s__naviforme | 826.5 | 725.4 | 813.9 | 899.6 |
p__Fusobacteria | c__Fusobacteriia | g__Fusobacterium | s__nucleatum_subsp._animalis | 1650 | 1387 | 1575 | 1896 |
p__Fusobacteria | c__Fusobacteriia | g__Fusobacterium | s__nucleatum_subsp._nucleatum | 223.2 | 165.8 | 149.4 | 351.4 |
p__Fusobacteria | c__Fusobacteriia | g__Fusobacterium | s__nucleatum_subsp._polymorphum | 1439 | 1467 | 1499 | 1345 |
p__Fusobacteria | c__Fusobacteriia | g__Fusobacterium | s__nucleatum_subsp._vincentii | 3930 | 3647 | 3798 | 4262 |
p__Fusobacteria | c__Fusobacteriia | g__Fusobacterium | s__periodonticum | 87.3 | 57.2 | 88.7 | 102.2 |
p__Fusobacteria | c__Fusobacteriia | g__Fusobacterium | s__sp._oral_taxon_203 | 1968 | 1576 | 2223 | 1857 |
p__Fusobacteria | c__Fusobacteriia | g__Fusobacterium | s__sp._oral_taxon_370 | 34.1 | 36.1 | 37.0 | 29.2 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__buccalis | 399.0 | 365.5 | 436.8 | 368.7 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__goodfellowii | 22.9 | 26.0 | 24.7 | 18.7 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__hofstadii | 346.7 | 418.6 | 364.3 | 283.4 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__hongkongensis | 388.3 | 297.8 | 360.4 | 475.3 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__shahii | 387.0 | 312.2 | 250.1 | 607.1 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__sp._oral_taxon_212 | 253.4 | 237.4 | 264.5 | 248.1 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__sp._oral_taxon_215 | 107.2 | 117.0 | 107.5 | 101.2 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__sp._oral_taxon_219 | 36.9 | 37.3 | 35.4 | 38.6 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__sp._oral_taxon_223 | 78.4 | 39.0 | 82.6 | 95.1 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__sp._oral_taxon_225 | 244.7 | 299.5 | 328.2 | 105.5 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__sp._oral_taxon_392 | 195.9 | 187.9 | 212.8 | 178.3 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__sp._oral_taxon_417 | 363.2 | 241.0 | 408.8 | 372.5 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__sp._oral_taxon_498 | 210.4 | 135.1 | 176.6 | 296.4 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__sp._oral_taxon_879 | 52.3 | 57.8 | 31.4 | 76.5 |
p__Fusobacteria | c__Fusobacteriia | g__Leptotrichia | s__wadei | 767.1 | 783.8 | 675.4 | 877.0 |
p__Gracilibacteria_(GN02) | c__GN02_[C-2] | g__GN02_[G-2] | s__sp._oral_taxon_873 | 24.8 | 31.7 | 18.7 | 29.0 |
p__Proteobacteria | c__Alphaproteobacteria | g__Bradyrhizobium | s__elkanii | 31.9 | 36.6 | 31.5 | 29.8 |
p__Proteobacteria | c__Alphaproteobacteria | g__Brevundimonas | s__diminuta | 0.6 | 0.9 | 0.5 | 0.6 |
p__Proteobacteria | c__Alphaproteobacteria | g__Porphyrobacter | s__tepidarius | 0.2 | 0.1 | 0.1 | 0.3 |
p__Proteobacteria | c__Alphaproteobacteria | g__Sphingomonas | s__echinoides | 9.2 | 8.0 | 9.3 | 9.7 |
p__Proteobacteria | c__Alphaproteobacteria | g__Sphingomonas | s__sp._oral_taxon_006 | 0.5 | 0.3 | 0.2 | 1.1 |
p__Proteobacteria | c__Betaproteobacteria | g__Eikenella | s__corrodens | 264.4 | 284.9 | 279.0 | 233.9 |
p__Proteobacteria | c__Betaproteobacteria | g__Kingella | s__denitrificans | 159.5 | 149.8 | 146.3 | 182.3 |
p__Proteobacteria | c__Betaproteobacteria | g__Kingella | s__oralis | 311.9 | 324.2 | 285.2 | 339.8 |
p__Proteobacteria | c__Betaproteobacteria | g__Lautropia | s__mirabilis | 145.1 | 173.9 | 144.3 | 129.9 |
p__Proteobacteria | c__Betaproteobacteria | g__Leptothrix | s__sp._oral_taxon_025 | 0.3 | 0.6 | 0.4 | 0.2 |
p__Proteobacteria | c__Betaproteobacteria | g__Neisseria | s__bacilliformis | 84.2 | 70.1 | 80.2 | 97.4 |
p__Proteobacteria | c__Betaproteobacteria | g__Neisseria | s__elongata | 499.3 | 682.7 | 506.5 | 387.0 |
p__Proteobacteria | c__Betaproteobacteria | g__Neisseria | s__flavescens | 440.2 | 302.3 | 352.9 | 631.0 |
p__Proteobacteria | c__Betaproteobacteria | g__Neisseria | s__oralis | 376.2 | 558.0 | 272.4 | 409.2 |
p__Proteobacteria | c__Betaproteobacteria | g__Neisseria | s__pharyngis | 70.1 | 86.1 | 41.5 | 98.3 |
p__Proteobacteria | c__Betaproteobacteria | g__Neisseria | s__sicca | 730.6 | 656.1 | 784.9 | 701.7 |
p__Proteobacteria | c__Betaproteobacteria | g__Neisseria | s__subflava | 174.1 | 125.9 | 194.7 | 174.4 |
p__Proteobacteria | c__Betaproteobacteria | g__Ottowia | s__sp._oral_taxon_894 | 70.0 | 88.8 | 70.2 | 59.3 |
p__Proteobacteria | c__Deltaproteobacteria | g__Desulfobulbus | s__sp._oral_taxon_041 | 139.1 | 91.1 | 132.8 | 174.4 |
p__Proteobacteria | c__Epsilonproteobacteria | g__Campylobacter | s__concisus | 242.1 | 186.5 | 241.4 | 274.2 |
p__Proteobacteria | c__Epsilonproteobacteria | g__Campylobacter | s__curvus | 39.6 | 46.6 | 31.6 | 46.1 |
p__Proteobacteria | c__Epsilonproteobacteria | g__Campylobacter | s__gracilis | 858.3 | 734.1 | 849.7 | 939.1 |
p__Proteobacteria | c__Epsilonproteobacteria | g__Campylobacter | s__showae | 496.9 | 422.2 | 521.4 | 507.0 |
p__Proteobacteria | c__Gammaproteobacteria | g__Aggregatibacter | s__actinomycetemcomitans | 49.2 | 68.1 | 46.4 | 42.2 |
p__Proteobacteria | c__Gammaproteobacteria | g__Aggregatibacter | s__aphrophilus | 312.9 | 232.7 | 392.3 | 254.5 |
p__Proteobacteria | c__Gammaproteobacteria | g__Aggregatibacter | s__paraphrophilus | 111.5 | 126.7 | 141.8 | 63.6 |
p__Proteobacteria | c__Gammaproteobacteria | g__Aggregatibacter | s__segnis | 233.8 | 295.3 | 259.7 | 165.6 |
p__Proteobacteria | c__Gammaproteobacteria | g__Aggregatibacter | s__sp._oral_taxon_458 | 158.1 | 130.8 | 151.6 | 181.8 |
p__Proteobacteria | c__Gammaproteobacteria | g__Aggregatibacter | s__sp._oral_taxon_513 | 61.5 | 35.1 | 85.1 | 45.7 |
p__Proteobacteria | c__Gammaproteobacteria | g__Cardiobacterium | s__hominis | 277.9 | 342.4 | 295.3 | 219.1 |
p__Proteobacteria | c__Gammaproteobacteria | g__Cardiobacterium | s__valvarum | 234.5 | 257.9 | 245.6 | 207.0 |
p__Proteobacteria | c__Gammaproteobacteria | g__Haemophilus | s__haemolyticus | 50.2 | 95.7 | 34.4 | 45.4 |
p__Proteobacteria | c__Gammaproteobacteria | g__Haemophilus | s__parahaemolyticus | 78.5 | 71.7 | 121.9 | 26.0 |
p__Proteobacteria | c__Gammaproteobacteria | g__Haemophilus | s__parainfluenzae | 1042 | 1480 | 940.9 | 927.4 |
p__Proteobacteria | c__Gammaproteobacteria | g__Haemophilus | s__sp._oral_taxon_036 | 75.0 | 82.2 | 71.0 | 76.2 |
p__Proteobacteria | c__Gammaproteobacteria | g__Pseudomonas | s__fluorescens | 52.5 | 52.2 | 53.4 | 51.6 |
p__SR1 | c__SR1_[C-1] | g__SR1_[G-1] | s__sp._oral_taxon_874 | 26.9 | 26.4 | 29.2 | 24.3 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-1] | s__sp._oral_taxon_346 | 1103 | 901.9 | 1098 | 1223 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-1] | s__sp._oral_taxon_347 | 100.0 | 143.7 | 105.6 | 68.1 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-1] | s__sp._oral_taxon_348 | 106.9 | 75.8 | 123.5 | 102.9 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-1] | s__sp._oral_taxon_349 | 1107 | 900.9 | 1062 | 1279 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-1] | s__sp._oral_taxon_352 | 49.4 | 42.8 | 43.6 | 60.5 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-1] | s__sp._oral_taxon_488 | 136.2 | 146.7 | 156.0 | 104.4 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-1] | s__sp._oral_taxon_869 | 125.1 | 120.6 | 128.5 | 123.1 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-1] | s__sp._oral_taxon_952 | 665.5 | 706.5 | 669.6 | 637.1 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-2] | s__sp._oral_taxon_350 | 156.1 | 137.7 | 139.2 | 188.3 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-3] | s__sp._oral_taxon_351 | 33.2 | 21.1 | 35.6 | 36.9 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-5] | s__sp._oral_taxon_356 | 616.8 | 371.0 | 677.8 | 675.5 |
p__Saccharibacteria_(TM7) | c__TM7_[C-1] | g__TM7_[G-6] | s__sp._oral_taxon_870 | 82.6 | 93.6 | 83.9 | 74.6 |
p__Spirochaetes | c__Spirochaetia | g__Treponema | s__denticola | 372.7 | 246.3 | 374.0 | 442.1 |
p__Spirochaetes | c__Spirochaetia | g__Treponema | s__lecithinolyticum | 65.5 | 62.1 | 65.8 | 67.0 |
p__Spirochaetes | c__Spirochaetia | g__Treponema | s__maltophilum | 83.6 | 56.0 | 73.1 | 112.7 |
p__Spirochaetes | c__Spirochaetia | g__Treponema | s__medium | 45.7 | 27.4 | 60.7 | 36.3 |
p__Spirochaetes | c__Spirochaetia | g__Treponema | s__socranskii | 297.0 | 211.8 | 294.6 | 348.0 |
p__Spirochaetes | c__Spirochaetia | g__Treponema | s__sp._oral_taxon_231 | 102.7 | 75.9 | 117.3 | 98.6 |
p__Spirochaetes | c__Spirochaetia | g__Treponema | s__sp._oral_taxon_237 | 160.6 | 104.6 | 160.5 | 192.0 |
p__Spirochaetes | c__Spirochaetia | g__Treponema | s__sp._oral_taxon_247 | 44.0 | 8.2 | 68.9 | 31.7 |
p__Spirochaetes | c__Spirochaetia | g__Treponema | s__vincentii | 27.6 | 36.1 | 33.3 | 15.4 |
p__Synergistetes | c__Synergistia | g__Fretibacterium | s__fastidiosum | 551.9 | 462.9 | 595.3 | 545.5 |
p__Synergistetes | c__Synergistia | g__Fretibacterium | s__sp._oral_taxon_358 | 81.3 | 46.0 | 93.4 | 85.3 |
p__Synergistetes | c__Synergistia | g__Fretibacterium | s__sp._oral_taxon_359 | 722.3 | 648.0 | 814.1 | 644.6 |
p__Synergistetes | c__Synergistia | g__Fretibacterium | s__sp._oral_taxon_360 | 1247 | 818.0 | 1325 | 1385 |
p__Synergistetes | c__Synergistia | g__Fretibacterium | s__sp._oral_taxon_361 | 54.1 | 4.5 | 61.8 | 71.9 |
p__Synergistetes | c__Synergistia | g__Fretibacterium | s__sp._oral_taxon_362 | 212.8 | 161.8 | 233.9 | 213.9 |
p__Synergistetes | c__Synergistia | g__Pyramidobacter | s__piscolens | 5.7 | 7.9 | 4.6 | 5.9 |