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Table 6 Prevalence (present, absent) for each of 267 bacterial species identified, overall and by age categories

From: Composition and diversity of the subgingival microbiome and its relationship with age in postmenopausal women: an epidemiologic investigation

Rank OrderaOTU Label Age categories (years)
Overall
(N = 1219)
50–59
(N = 239)
60–69
(N = 554)
≥70
(N = 426)
%%%%
1Streptococcus oralis100100100100
1Veillonella dispar100100100100
1Veillonella parvula100100100100
4Selenomonas sputigena99.899.699.899.8
5Fusobacterium nucleatum_subsp._vincentii99.699.699.699.5
6Fusobacterium nucleatum_subsp._animalis99.399.699.399.3
6Granulicatella adiacens99.399.299.599.3
8Streptococcus sanguinis99.310099.399.1
9Rothia dentocariosa99.299.299.399.1
10Campylobacter gracilis99.199.698.999.1
11Selenomonas noxia99.098.799.199.1
11Streptococcus gordonii99.098.798.999.3
13Fusobacterium nucleatum_subsp._polymorphum98.699.298.997.9
14Fusobacterium sp._oral_taxon_20398.498.798.098.8
14Streptococcus cristatus98.498.798.298.6
14Fusobacterium naviforme98.499.298.697.7
17Actinomyces naeslundii98.097.998.297.9
18Corynebacterium matruchotii97.596.797.398.1
19Prevotella oris97.297.597.396.9
20Actinomyces oris97.197.596.997.2
21Streptococcus salivarius97.096.796.897.7
21Parvimonas micra97.095.896.997.7
23Haemophilus parainfluenzae96.998.797.395.3
24Streptococcus intermedius96.897.995.597.9
25Veillonella atypica96.495.095.798.1
26Rothia mucilaginosa96.196.296.296.0
27Dialister invisus95.495.894.696.2
28Campylobacter concisus95.295.894.895.3
29Capnocytophaga gingivalis94.995.894.994.4
29TM7_[G-1] sp._oral_taxon_34694.995.096.093.4
31Prevotella nigrescens94.295.094.293.7
32Kingella oralis93.092.994.291.5
33Bergeyella sp._oral_taxon_32292.792.991.993.7
34Gemella haemolysans92.591.694.290.8
35Actinomyces sp._oral_taxon_16992.393.793.090.6
36Actinomyces sp._oral_taxon_18092.194.192.290.8
36Eikenella corrodens92.195.492.689.7
38Prevotella melaninogenica91.692.190.692.7
38TM7_[G-1] sp._oral_taxon_34991.692.992.489.7
40Campylobacter showae91.391.691.091.5
41Actinomyces johnsonii91.191.691.790.1
42Capnocytophaga granulosa90.889.592.489.4
43Selenomonas sp._oral_taxon_13690.789.190.492.0
44Bacteroidales_[G-2] sp._oral_taxon_27490.488.391.590.1
45Selenomonas artemidis90.390.490.490.1
46Capnocytophaga leadbetteri90.290.091.788.5
46Actinomyces massiliensis90.292.191.387.6
48Fretibacterium sp._oral_taxon_36090.091.290.488.7
49Gemella morbillorum89.889.590.389.4
50Streptococcus sp._oral_taxon_07489.387.091.088.3
51Rothia aeria89.290.091.985.2
52Treponema socranskii88.888.788.489.4
53Leptotrichia hongkongensis88.785.489.289.9
54Streptococcus mutans88.484.988.190.8
54Cardiobacterium hominis88.491.689.285.4
54TM7_[G-1] sp._oral_taxon_95288.490.090.385.0
57Actinomyces gerencseriae87.984.987.090.6
58Leptotrichia wadei87.786.687.089.2
59Anaeroglobus geminatus87.689.186.588.3
60Streptococcus parasanguinis_II87.487.484.391.5
61Alloprevotella tannerae87.390.085.688.0
62Actinomyces sp._oral_taxon_17187.288.787.486.2
62Capnocytophaga sputigena87.288.789.084.0
64Fusobacterium nucleatum_subsp._nucleatum86.890.886.585.0
65Catonella morbi86.687.087.285.7
66Corynebacterium durum85.688.786.882.2
66Selenomonas infelix85.688.785.683.8
68Prevotella denticola85.582.884.788.0
69Prevotella sp._oral_taxon_31785.288.383.685.4
70Leptotrichia sp._oral_taxon_21284.887.487.080.5
71Porphyromonas sp._oral_taxon_27984.583.785.783.3
72Neisseria sicca83.580.886.381.5
73Gemella sanguinis83.185.480.984.7
74Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brac83.087.482.581.2
75Tannerella forsythia82.982.083.882.4
75Neisseria flavescens82.977.885.482.4
77Prevotella sp._oral_taxon_30082.580.881.485.0
78Prevotella maculosa82.380.881.484.3
79Neisseria elongata82.280.384.180.8
80Selenomonas flueggei82.079.982.981.9
81Selenomonas sp._oral_taxon_89281.885.483.677.5
82Actinomyces israelii81.779.980.983.8
83Oribacterium sp._oral_taxon_07881.478.280.184.7
84Lachnoanaerobaculum saburreum81.378.782.581.2
85Megasphaera micronuciformis81.179.178.585.4
85Prevotella salivae81.173.280.985.7
87Streptococcus parasanguinis_I80.680.378.284.0
88Cardiobacterium valvarum80.581.282.177.9
89Prevotella oulorum80.182.877.681.9
89Veillonellaceae_[G-1] sp._oral_taxon_15080.178.279.182.4
91Leptotrichia sp._oral_taxon_41779.774.580.381.7
92Veillonella rogosae79.682.482.773.9
93Streptococcus anginosus79.581.278.080.5
94Veillonellaceae_[G-1] sp._oral_taxon_15579.477.477.882.6
95Fretibacterium fastidiosum79.279.180.178.2
96Lautropia mirabilis78.282.878.974.6
97Actinobaculum sp._oral_taxon_18378.078.778.377.2
98Fusobacterium periodonticum77.774.982.173.5
99Selenomonas sp._oral_taxon_91977.284.175.675.4
100Selenomonas sp._oral_taxon_13776.880.376.974.6
101Atopobium parvulum76.576.273.880.3
101Streptococcus lactarius76.580.375.176.1
103Kingella denitrificans76.372.076.079.1
104Capnocytophaga sp._oral_taxon_33675.177.475.573.5
105Lachnospiraceae_[G-3] sp._oral_taxon_10073.777.073.672.1
106Atopobium rimae73.372.473.174.2
107Streptococcus constellatus73.072.871.774.9
108Tannerella sp._oral_taxon_28672.869.974.971.8
108Selenomonas sp._oral_taxon_13472.875.772.970.9
110Leptotrichia buccalis72.064.976.070.9
111Selenomonas sp._oral_taxon_14671.973.272.969.7
112Leptotrichia sp._oral_taxon_21571.875.372.469.0
113Leptotrichia sp._oral_taxon_39271.474.574.965.0
114TM7_[G-5] sp._oral_taxon_35671.274.572.268.1
115Dialister pneumosintes70.674.170.269.2
115Prevotella sp._oral_taxon_47270.671.575.364.1
117Streptococcus sp._oral_taxon_05670.669.073.368.1
118Fretibacterium sp._oral_taxon_35970.566.971.171.6
119Solobacterium moorei70.469.070.071.6
120Abiotrophia defectiva70.169.972.966.7
121Lachnoanaerobaculum umeaense69.369.970.267.8
122Parvimonas sp._oral_taxon_39369.269.970.267.4
123Actinomyces meyeri67.871.169.763.4
124Centipeda periodontii67.764.069.167.8
125Leptotrichia shahii67.672.466.666.2
126Olsenella sp._oral_taxon_80766.961.967.169.2
127Actinobaculum sp._oral_taxon_84866.364.966.167.4
128Leptotrichia hofstadii66.063.668.264.6
128Neisseria oralis66.066.169.062.2
128Prevotella histicola66.062.362.872.1
131Actinomyces sp._oral_taxon_17865.861.165.369.0
132Stomatobaculum longum65.762.363.770.2
132TM7_[G-1] sp._oral_taxon_35265.760.370.662.4
134Capnocytophaga sp._oral_taxon_32665.464.468.162.4
135Prevotella oralis64.563.665.264.1
136Streptococcus sinensis63.965.762.165.3
137Alloprevotella sp._oral_taxon_30863.568.661.962.7
138Porphyromonas sp._oral_taxon_28463.364.466.858.2
138Prevotella pallens63.363.261.765.5
140Aggregatibacter sp._oral_taxon_45863.265.765.358.9
141Porphyromonas endodontalis63.169.563.758.7
142Prevotella saccharolytica63.065.365.059.2
143Selenomonas sp._oral_taxon_12662.062.363.460.1
144Lachnoanaerobaculum orale61.163.258.563.4
145Treponema maltophilum61.059.062.360.3
146Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yuri60.264.062.355.4
147Veillonella denticariosi60.156.560.861.3
148Sphingomonas echinoides59.864.961.754.5
149Streptococcus australis59.757.359.062.0
150TM7_[G-1] sp._oral_taxon_34859.657.763.455.9
151TM7_[G-1] sp._oral_taxon_48857.856.961.254.0
152Ruminococcaceae_[G-1] sp._oral_taxon_07556.958.259.752.6
153Selenomonas sp._oral_taxon_93656.858.256.356.8
154Prevotella buccae56.749.454.763.4
155Leptotrichia sp._oral_taxon_22556.460.358.751.4
155Prevotella pleuritidis56.455.259.453.3
157Alloprevotella rava56.257.756.954.5
158Aggregatibacter aphrophilus56.157.759.650.7
159Treponema denticola56.059.458.151.4
160Peptostreptococcus stomatis55.964.055.152.3
161Pseudomonas fluorescens55.553.657.054.5
162Actinomyces sp._oral_taxon_17055.260.357.050.0
163Porphyromonas gingivalis55.151.056.355.9
164Haemophilus sp._oral_taxon_03655.059.454.752.8
165Johnsonella ignava54.654.056.352.8
166Porphyromonas catoniae54.457.756.549.8
167Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infi54.247.354.757.5
168Prevotella sp._oral_taxon_29253.849.454.355.6
169Fretibacterium sp._oral_taxon_36253.653.653.853.3
170TM7_[G-1] sp._oral_taxon_34753.258.254.349.1
171Leptotrichia sp._oral_taxon_21952.749.454.252.6
172Aggregatibacter segnis52.156.154.946.2
173TM7_[G-3] sp._oral_taxon_35151.945.655.450.9
174Fusobacterium sp._oral_taxon_37051.145.655.648.4
175Prevotella sp._oral_taxon_31350.553.146.454.2
176Prevotella loescheii50.452.354.543.9
177Desulfobulbus sp._oral_taxon_04150.348.150.950.7
178Capnocytophaga sp._oral_taxon_86449.151.952.043.9
179Ottowia sp._oral_taxon_89448.449.450.245.5
180Microbacterium flavescens48.050.249.544.8
181Leptotrichia sp._oral_taxon_49847.842.348.250.5
182Granulicatella elegans47.352.745.546.5
183Filifactor alocis46.850.246.844.8
184Campylobacter curvus46.245.646.446.2
185Mycoplasma salivarium45.047.745.343.2
186Capnocytophaga sp._oral_taxon_33844.842.744.446.5
187Capnocytophaga sp._oral_taxon_90244.343.146.642.0
188Treponema sp._oral_taxon_23143.651.545.337.1
189Tannerella sp._oral_taxon_80843.139.345.741.8
190Prevotella intermedia42.840.243.343.7
191TM7_[G-6] sp._oral_taxon_87042.743.944.239.9
192Mitsuokella sp._oral_taxon_13142.235.641.047.7
193Haemophilus haemolyticus42.047.341.339.9
194Prevotella veroralis41.744.440.841.3
195Veillonellaceae_[G-1] sp._oral_taxon_12940.937.740.843.0
195Aggregatibacter paraphrophilus40.945.242.236.6
197Pseudoramibacter alactolyticus40.933.541.544.1
198Bergeyella sp._oral_taxon_90740.639.742.838.3
199Bifidobacterium dentium40.533.937.947.7
199TM7_[G-1] sp._oral_taxon_86940.541.841.538.5
201Prevotella sp._oral_taxon_30640.336.039.543.7
202Prevotella dentalis39.340.236.542.5
203Shuttleworthia satelles39.234.737.543.9
204Veillonella sp._oral_taxon_78039.140.642.434.0
205Capnocytophaga sp._oral_taxon_41238.738.941.535.0
206Neisseria subflava38.639.337.439.7
206Scardovia wiggsiae38.637.237.740.4
208Leptotrichia sp._oral_taxon_22337.842.336.537.1
209Peptostreptococcaceae_[XI][G-6] [Eubacterium]_noda37.235.637.038.5
209Selenomonas sp._oral_taxon_93737.236.435.240.1
211Bacteroidetes_[G-5] sp._oral_taxon_51136.841.037.233.8
212Capnocytophaga sp._oral_taxon_32336.736.037.436.2
213Selenomonas sp._oral_taxon_14936.430.533.843.2
213Selenomonas sp._oral_taxon_44236.430.137.538.5
215SR1_[G-1] sp._oral_taxon_87436.339.340.329.6
216Porphyromonas sp._oral_taxon_27536.036.437.733.6
217Selenomonas sp._oral_taxon_47835.931.438.435.2
218Alloprevotella sp._oral_taxon_47335.839.736.832.4
219Neisseria bacilliformis35.535.135.435.9
220Capnocytophaga sp._oral_taxon_32435.432.638.133.3
221Veillonellaceae_[G-1] sp._oral_taxon_14535.235.136.134.0
222Atopobium sp._oral_taxon_19934.936.036.132.6
223Lachnospiraceae_[G-8] sp._oral_taxon_50034.833.135.734.5
224TM7_[G-2] sp._oral_taxon_35034.634.734.734.5
225Bacteroidaceae_[G-1] sp._oral_taxon_27233.126.833.935.7
225Capnocytophaga sp._oral_taxon_90333.131.836.130.0
225Selenomonas dianae33.128.935.032.9
228Prevotella baroniae33.032.233.432.9
229Leptotrichia goodfellowii32.237.234.127.0
230Prevotella micans31.429.332.731.0
231Porphyromonas sp._oral_taxon_27831.031.831.929.3
232Prevotella sp._oral_taxon_31430.830.131.430.5
233Haemophilus parahaemolyticus30.337.231.824.4
234Anaerolineae_[G-1] sp._oral_taxon_43930.225.530.033.1
235Selenomonas sp._oral_taxon_13330.128.930.530.3
236Treponema lecithinolyticum29.530.131.226.8
237Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saph28.322.231.427.7
238Treponema sp._oral_taxon_23727.032.228.921.6
239Neisseria pharyngis25.825.125.526.8
240Leptotrichia sp._oral_taxon_87925.425.925.624.9
241Brevundimonas diminuta25.327.625.823.2
242Bradyrhizobium elkanii24.926.422.726.8
242Capnocytophaga sp._oral_taxon_33224.929.726.220.4
244Megasphaera sp._oral_taxon_12324.532.224.220.7
245Capnocytophaga sp._oral_taxon_38022.220.524.919.7
246Treponema vincentii22.023.023.519.5
247Prevotella sp._oral_taxon_37621.426.823.515.7
248Prevotella sp._oral_taxon_52621.121.821.720.0
249Aggregatibacter sp._oral_taxon_51320.221.823.115.5
250Lactobacillus gasseri19.918.017.923.7
251Fretibacterium sp._oral_taxon_35819.316.719.320.7
252Mitsuokella sp._oral_taxon_52118.718.419.917.4
253Fretibacterium sp._oral_taxon_36118.515.519.119.2
254Prevotella sp._oral_taxon_47518.219.220.015.3
255Treponema medium18.116.319.517.4
256Johnsonella sp._oral_taxon_16616.712.618.616.7
257Streptococcus sobrinus15.913.814.419.0
258Prevotella multiformis15.516.315.515.0
259Butyrivibrio sp._oral_taxon_08014.515.115.912.4
260GN02_[G-2] sp._oral_taxon_87313.710.915.013.6
261Aggregatibacter actinomycetemcomitans12.312.111.413.6
262Leptothrix sp._oral_taxon_02510.913.411.48.9
263Atopobium sp._oral_taxon_4168.75.48.510.8
264Sphingomonas sp._oral_taxon_0067.25.97.97.0
265Porphyrobacter tepidarius6.97.16.17.7
266Treponema sp._oral_taxon_2474.86.34.54.2
267Pyramidobacter piscolens4.02.93.84.9
  1. aBacteria in the table are rank ordered according to their prevalence in the overall cohort
  2. Dashed line inserted below top 20 taxa